Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCPEVSKALVPCVTYLATGSSFVHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQR-RHRLN-----FNLVKQLPGKCNVNIRYNITTQNPNCSQVK
3OB4 Chain:A ((429-485))
-----------------------ERCCNELNEFE------NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--------------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21264 for 270 contacts (-78.8/contact) +
2D Compatibility (PS) -5101 + (NN) -177 + (LL) 2264
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -26228.0 ( -97.14 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: