Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDIDLLLPCLNASR----DPRVK-----PDKRCCDAIRQFLPPRKQKSAIDCLCRLATSKEAVA------------LK--------INLSAAIAI--PQKCGIKFEQRFYCQG
1BEA Chain:A ((15-111))
-----NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISG-----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32435 for 411 contacts (-78.9/contact) +
2D Compatibility (PS) -6683 + (NN) -1567 + (LL) 600
1D Compatibility (HY) -800 + (ID) 550
Total energy: -41435.0 ( -100.82 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: