Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASTPSSNCESAQMKLVPCLTYVTGS---DSKP---PTECCSGLKDLNTNNPTCLCQLITQLNST---SSGSS-----NVNVAKVLALPRDCSVTLITSDCPGKDLL
1HSS Chain:A ((15-102))
------------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLP------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36631 for 404 contacts (-90.7/contact) +
2D Compatibility (PS) -6488 + (NN) -2456 + (LL) 592
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -48733.0 ( -120.63 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: