Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGGCN--AGQLSVCAVAITSGSP-PSAECCSNLRAQQGCLCQYAKDPN------------YGRY--ISSPYARQTVASCGIPVP-------KC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23675 for 365 contacts (-64.9/contact) +
2D Compatibility (PS) -6592 + (NN) -1665 + (LL) 444
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -34338.0 ( -94.08 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: