Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSPTQLSPCAPAIIGNAAPTAACCGRVKAHPASCLCKYKKDPNLKRYVNSPNGKKLFAACKVRLPSC-
1L6H Chain:A ((1-69))
AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31290 for 515 contacts (-60.8/contact) +
2D Compatibility (PS) -7024 + (NN) -6606 + (LL) -140
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -53510.0 ( -103.90 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: