Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADRMA--LKLAPCASAGQDPASA-----------------PSSGCCTAVHTIGKQSPKCLCAVMLSNTAR---SA-G--I---KPEAAITIPKRCNLVDRPVGYKCGAYTLP
1W2Q Chain:A ((15-112))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30130 for 457 contacts (-65.9/contact) +
2D Compatibility (PS) -6993 + (NN) -103 + (LL) 488
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -42088.0 ( -92.10 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: