Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGLGIDATVCLCTAIHLKVLGLNVDIPLALKLLVTCGRELPNGLTC
1N89 Chain:A ((4-65))
----------------ASQLAVCASAILS-----GAKPSGECCGNLRAQ----QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP-----
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53040 for 395 contacts (-134.3/contact) +
2D Compatibility (PS) -6209 + (NN) -991 + (LL) 1444
1D Compatibility (HY) 800 + (ID) 800
Total energy: -58796.0 ( -148.85 by residue)
QMean score : 0.257
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: