Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDACTGL-PGLLNCAPFLLGSVSSPDAKCCKSLKWLSQHAINREDKRELCKCLKIEDLKHKGVILDRAKALPRLCKVQLPVPLIPDNKDCDKIKAADEE
1BWO Chain:A ((2-90))
--DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISL-NIDCSRV------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31223 for 590 contacts (-52.9/contact) +
2D Compatibility (PS) -9327 + (NN) -6390 + (LL) 496
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -52044.0 ( -88.21 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: