Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQL--NQLIPCLSYVQGQ------ATQP-----------AQSCCSGLKSIAGSNPACLCSLISANAGS----IPG--I--N-STLALELPAKCNLQGLNPSLCSVFISGFLPLR
1W2Q Chain:A ((15-119))
-----SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRCDL---------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39719 for 468 contacts (-84.9/contact) +
2D Compatibility (PS) -7901 + (NN) -3960 + (LL) 776
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -57654.0 ( -123.19 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: