Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQL--NQLIPCLSYVQGQA------TQP-----------AQGCCSGLKSIAGSNPACLCSLISANAGS----IPG--I--N-STLALELPAKCNLQGLNPSLCSGKF
1W2Q Chain:A ((15-118))
-----SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRCD---
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40956 for 472 contacts (-86.8/contact) +
2D Compatibility (PS) -7804 + (NN) -3988 + (LL) 220
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -58978.0 ( -124.95 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: