Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------SHNVGALASSCEESDFLY------KSLPCVKGGTVMSTPSS-----QC--CVAVRAMALECL---CRLIVSATGA-SSEQTVKNYVKTCK-----MKAPPGFKC
1J5P Chain:A ((11-120))
HHMTVLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSG---
General information:
TITO was launched using:
RESULT:
Template:
1J5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22299 for 412 contacts (-54.1/contact) +
2D Compatibility (PS) -8610 + (NN) -5857 + (LL) 252
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -43114.0 ( -104.65 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1J5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J5P-query.scw
PDB file :
Tito_Scwrl_1J5P.pdb
: