Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQG---SNP---TQPCCNGLETVVKLNPACLCALVNS-------QLGN-------R-INITLALSLPSLCNLAGVTIDLCNPTGKFSFKI
1HSS Chain:A ((16-103))
------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI----------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48644 for 348 contacts (-139.8/contact) +
2D Compatibility (PS) -5839 + (NN) -878 + (LL) 1048
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -57963.0 ( -166.56 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: