Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNDFTALLPCQAATQDAQA------TPTAACCSVVEKFKDDPACLCSTIAA---A--KSAGISI--------NEANAESIPTRCKFQGYPSCAKKI
1HSS Chain:A ((16-104))
--------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIV-------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36813 for 373 contacts (-98.7/contact) +
2D Compatibility (PS) -6365 + (NN) -2633 + (LL) 496
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -49515.0 ( -132.75 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: