Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSAT---A---TPSAACCKVVEGFKSNPACLCSTIAAARAA---G---Y-----SINEHNAESIPTRCKLHGYTPCSKKN
1HSS Chain:A ((16-103))
--------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41860 for 402 contacts (-104.1/contact) +
2D Compatibility (PS) -6650 + (NN) -2306 + (LL) 244
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -55622.0 ( -138.36 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: