Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSAT---A---TPSGACCKVVEGFKSNPACLCSTIAAAKAA---G-YS---------INEHNAESIPTRCKLHGYTSCSKKN
1HSS Chain:A ((16-103))
--------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38925 for 390 contacts (-99.8/contact) +
2D Compatibility (PS) -6369 + (NN) -1882 + (LL) 420
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -51406.0 ( -131.81 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: