Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVT--TVVSQCSGSYVN-----GSP---------PSAGCCGAARAVSDGCLCPKVTPQIADAV-------------NKQRIQAMASACNRPLPRTCGALQFPSRK
2LVF Chain:A ((7-106))
-ECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-PMRCP--------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30263 for 437 contacts (-69.3/contact) +
2D Compatibility (PS) -7177 + (NN) 666 + (LL) 864
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -40910.0 ( -93.62 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: