Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEETRLAIKACKPVVYG-MDPSPACCERARVTH----------VECVCPLITPKLAA--LIDVNKAVRIIEGCGRKVP----RHYKCGSITTP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21142 for 446 contacts (-47.4/contact) +
2D Compatibility (PS) -7358 + (NN) -2298 + (LL) 468
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -32480.0 ( -72.83 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: