Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVPCGTVDMKAAACVGYATGKEPKPSPACCSGLQQLAGTVKTVDDKKNICRCLKNGVKAFAGVQDKFLSQIPAVCNIKVGFPVSLNTNCEA
1BWO Chain:A ((1-89))
-IDCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43135 for 606 contacts (-71.2/contact) +
2D Compatibility (PS) -8853 + (NN) -414 + (LL) 156
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -59546.0 ( -98.26 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: