Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET
1BWO Chain:A ((1-89))
--IDCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41015 for 606 contacts (-67.7/contact) +
2D Compatibility (PS) -9059 + (NN) -1329 + (LL) 316
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -58787.0 ( -97.01 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: