Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLI--GMAPCLNYITGSSS----------SP-----------SSSCCSQLASVVQSQPRCLCVALNGGG-AA-----L-G--ITINRTLALALPGACNVQTPPVSQCDAA
1PSY Chain:A ((17-116))
--QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45696 for 468 contacts (-97.6/contact) +
2D Compatibility (PS) -7282 + (NN) -2827 + (LL) 820
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -59135.0 ( -126.36 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: