Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-VTCS--PTELSSCVGAITSSTP-PSKLCCSKIKEQKPCLCQYLKNPN------------LKKF--VNSPNARKVASTCGTPIP-------KC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8730 for 360 contacts (-24.2/contact) +
2D Compatibility (PS) -6474 + (NN) -957 + (LL) 444
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -20117.0 ( -55.88 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: