Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTSCGPVVTSLYPCVSYIMN----GGNTVP----AAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQS---GFSYTN---LN----------LNLAAGL--PRKCGVNIPYQISPNTDCNSVH
1BEA Chain:A ((15-110))
---------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55206 for 414 contacts (-133.3/contact) +
2D Compatibility (PS) -7183 + (NN) -3108 + (LL) 1192
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -67855.0 ( -163.90 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: