Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSCPAVAQTLTPCLPHVSNPGPSPPQPCCNRVKTLNSQAKTTQDRHHVCGCLKSLMAGIPGLNLPAFASVAKDCGVDIGYIISPNTDCSK
1SIY Chain:A ((1-89))
-MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNS
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62195 for 678 contacts (-91.7/contact) +
2D Compatibility (PS) -9636 + (NN) -7602 + (LL) 4
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -88129.0 ( -129.98 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: