Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEESELARIKSSKAVVSKTIKEGKQGRKIPIWLMRQAGRSLPEYRRAVKDTSSFMEICYNTDLVVELTLQPVARFSMDAAIIFSDILIVADVLGCDVDFIRGVGPTIKPVKNFKELR--NPQKIETKTLPILNAIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKV---LNLHPSSLEQIIEQITEVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPDFPIIGFPKSAGSLYKDYCEKTGVSAVSIDYNVPIEWAKENLKIPLQGNLNPSLLAYNKMEAIKETKRIIDCFRDLP----FIFNLGHGVLPNTPIENIAALVDLVKSQ |
2EJA Chain:A ((18-334)) | ----------------------------RFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPLKILGVDAIIIFSDILVPLEPLGVKVEFVEGEGPKLSWSGKVSDLKKYDPSQ-NAYVYEIIKRVKEAQDEVP----VIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELK-DFSDTPVIYFFRGSSS-FIDLAVDYRADALSVDWSVDIPELFKIYDKGFQGNLEPAVL-YASEEVIEE--KTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260175 for 2596 contacts (-100.2/contact) +
2D Compatibility (PS) -32789 + (NN) -5998 + (LL) 2892
1D Compatibility (HY) -30000 + (ID) 5950
Total energy: -332020.0 ( -127.90 by residue)
QMean score : 0.573
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