Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVFLNNATKKIEGE-YHQSKETNAPVVLILHHHPQYGGSMDSKMIHSIYTSFIDNNFSALKINFRGVGKSTGTFDKGIGELTDAAIAIDWLQEHNP-SNVPIWIVGFSFGAWVAMQLTMRRPEIVGFIALSLPATKYD---------------------------------F-SFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHFLRDKEEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA
2JBW Chain:A ((128-369))
-ERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE-----SFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLEL-VPA---EHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGWPLEH---
General information:
TITO was launched using:
RESULT:
Template:
2JBW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155938 for 1750 contacts (-89.1/contact) +
2D Compatibility (PS) -22530 + (NN) -11123 + (LL) 1256
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -194935.0 ( -111.39 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2JBW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JBW-query.scw
PDB file :
Tito_Scwrl_2JBW.pdb
: