Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTDYNINLTDSALKKIHSLVEQEEDKSSILRVAVSGGGC---SGF-----KYNFLMDQIDK--NLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMVDNCSVKFLN-NSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV |
2P2E Chain:A ((3-108)) | ----LKITVTDDAAKKLQRYTDDS-NAVLLLDFD-DGVGALSKVGVCSLNSDFRILVVSKDMDYKK---------------------------------DYNEVI--DSNIGKFYYKGYSKMYMDDNMKISLNTNN--SLLRLTGDNSGELMPALSIQDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2795 for 544 contacts (-5.1/contact) +
2D Compatibility (PS) -9503 + (NN) 2613 + (LL) 148
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -11337.0 ( -20.84 by residue)
QMean score : 0.304
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