Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
3U8P Chain:A ((112-149))
-------------------------GQIDDALKLANEGKVKEA-QAAAEQLKTTRNAYHQKYRG
General information:
TITO was launched using:
RESULT:
Template:
3U8P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16462 for 192 contacts (85.7/contact) +
2D Compatibility (PS) -4257 + (NN) -3499 + (LL) 2656
1D Compatibility (HY) -400 + (ID) 550
Total energy: 10412.0 ( 54.23 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_3U8P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U8P-query.scw
PDB file :
Tito_Scwrl_3U8P.pdb
: