Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNYYEILEY---VAPEEINKAYKRLGLKCHPDKLLP---KKRKISRIVKKAINGAALSKLELEEMQSL
1BQ0 Chain:A ((2-61))
-KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEI-KEAYE--VLTDSQKRAAYDQ
General information:
TITO was launched using:
RESULT:
Template:
1BQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14289 for 338 contacts (-42.3/contact) +
2D Compatibility (PS) -5397 + (NN) -1637 + (LL) 372
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -25651.0 ( -75.89 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1BQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BQ0-query.scw
PDB file :
Tito_Scwrl_1BQ0.pdb
: