Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFISQPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWAKSFSKNKNLKVAMYCTGGIRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
1WV9 Chain:A ((2-90)) | ------------------------------------------------------------------------------------------------------------RKVRPEELPALL-EEGVLVVDVRPA--RSTPLPFAAEWVPLEKIQKGEH------GLPRRPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQAL---------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -37293 for 641 contacts (-58.2/contact) +
2D Compatibility (PS) -9195 + (NN) -1539 + (LL) 11608
1D Compatibility (HY) -800 + (ID) 600
Total energy: -37819.0 ( -59.00 by residue)
QMean score : 0.468
|
|
|