Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISSQIGSGIFMLPISLAPYGTYSLISWAVSGLGAILLALVFALLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWASSWVSSTAVIVASIGYLAPLFHNNIQNIRLFLEIALILAIMLINLRGITTVGHVELLLMTVKITVLFAVPIAALLLFDRNNFVVSEEISNLTISQAFARSTLLTLWCFIGLEIVTASAGSVENPSKTIPRAIVFGTVFVAIIYFINSLAIMGLIN---GNHLANSKAPYADVIKIILPGNWYLIISIVAFIVS-VSS-----LNAWFLADGQVA-LGLAKDKLMPQFFAKRNKYGAPFCGIIINTLGILALLVLISSKNFAKQV--------------TSIIDVSVVSFLFVY-LTCCLAFLKVIIQEKNYYKFLIGGMAVLFCCWIIYETPMNTLLIASLFPLSGTPTYLLWYRKPTK |
1W0H Chain:A ((5-203)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSYYDYICIIDFEAT----CEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMS-----KFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQ---DGCELRINEKM------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187978 for 1316 contacts (-142.8/contact) +
2D Compatibility (PS) -17904 + (NN) 1404 + (LL) 19996
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -189682.0 ( -144.14 by residue)
QMean score : 0.232
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