Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDAVKVIAEELKGYIERIEKLEQEKKNVQDQIHDVYAKAADKGWNIKVMKQIIRLRKMEDGDRAEQEILLNTYKRALGMSCEEN
3HRO Chain:A ((834-870))
------VSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIM------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1326 for 144 contacts (9.2/contact) +
2D Compatibility (PS) -4135 + (NN) -2241 + (LL) 3820
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -5230.0 ( -36.32 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3HRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HRO-query.scw
PDB file :
Tito_Scwrl_3HRO.pdb
: