Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVTEKN-GEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKE-------INKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
3J0A Chain:A ((671-763))
-----------------------------------------YDAYLCFSSKDFTWVQNALLKHLDTQY---S-DQNRFNLCFEERDFVPGENRIANIQDAIWNSRKIVCLVSRHFLRDGWCLEAFSYAQGRCLSDLNSALIMVVVGSLSQYQLMKHQ
General information:
TITO was launched using:
RESULT:
Template:
3J0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7641 for 501 contacts (-15.3/contact) +
2D Compatibility (PS) -9389 + (NN) -5705 + (LL) 4684
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -23951.0 ( -47.81 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_3J0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J0A-query.scw
PDB file :
Tito_Scwrl_3J0A.pdb
: