Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGYKNH-DLETFDDIFDSVFKIVYFQDKQLHEILDS--GEISKVLEILEIPHPSGKSFFLKEYLQKQVCRKKRAITQNSFRHFHTTIFSTTYKHFS-------
2L3N Chain:A ((1-104))
SVSILRSSVNHREVDEAIDNILRYTNSTEQQFLEAMESTGGRVRIAIAKLLSKQTSGGSGGSKLGGSGGS-RKDLSVKGMLYDSDSQQILNRLRERVSGSTAQSA
General information:
TITO was launched using:
RESULT:
Template:
2L3N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36657 for 466 contacts (-78.7/contact) +
2D Compatibility (PS) -9600 + (NN) 525 + (LL) 56
1D Compatibility (HY) 400 + (ID) 800
Total energy: -46076.0 ( -98.88 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2L3N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3N-query.scw
PDB file :
Tito_Scwrl_2L3N.pdb
: