Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMELKMHNV-KGTENLK-------FDAEVGKVLNIVIHSLYTNKDIFLRELVSNASDACDKLRYESQLNPNLLDSSGE--LKITISSNKDENELYVTDNGIGMSRQDLIGNLGTIASSGTQKFLDAIKNSKDSSQAVELIGKFGVGFYSSFMVASEVIVESRKA-GEEESWVWRSTGDGEYSISKLDNQIPCGTKITLVMRPEENEFLDKFRIENIVTTYSDHINFPVEFIDEEGKSEKLNSKAAIWTKLKNDVTQEEHNDFFRGVAHVGGEPWMILHNKNEGAIEYTNLLYVPSIKPFDLFHPDRR-CSVKLYVNKVFITEDNVQIIPQYLRFLKGVVDSPDLPLNISRETLQNNRVVEQIRKSLTKRVISELGKKAKENLEEYTKFWTNFGAVLKEGLCEAMPTEEREALLSICRFHSTG--DKKLVSIDDYISRMKPEQGYIYYLTGNSLDSVKNSPQLEGFISKGLEVLLFVDPVDDFWTSVIHEYKGQKFKSVTRADVDLEKFSPEEKDKENKSDEER-AEGNTDSILQYFTKVLGNAVKSVKISKKLTDSPVCLAVDE-GAMD--LRMERFLREQNQLNYRTPKVLEVNTKHSVIKSIIKSYAENGENPTLEDMVHLLFYQACIVEGEEMDDASLFAKKLNNLLGKVII |
| 4J0B Chain:B ((14-644)) | -----LHNIITDTENVQGSFSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNGSDALEKLRH------RMITAG--APMEIHLQTDSVKGTFTIQDTGVGMNKEDLVSNLGTIARSGSKAFLDALQ-----SSSI--IGQFGVGFYSAFMVADKVEVYSQSAEADAPGYKWSSDGSGVFEVAEASG-VRQGTKIVLHLKDDCKEFSSEDRVKEVVTKYSNFVSFPI-FLN----GRRLNTLQALWMMEPKDISEWQHEEFYRYVAQAYDKPRYTLHYRADAPLNIRSIFYVPEMKP-SMFDVSREM-SVALYSRKILIQTK--DILPKWLRFLRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRVIRFLLDQSKKDPEKYARFFEDYGLFMREGIVTTGEQSVKEDIAKLLRFESSALPAGQQTSLMEYSSRMKAGTRNIYYLCAPNRHLAEHSPYFEAMKQKDMEVLFCFEQFDELTLLHLREFDRKKLISA-ETDIVVDHYK-EEKFQDSKPASERLSSEQAEDLLAWMRNALVQRVTNIKVTPRLDTHPAMITVLEMGAARHFLRT------------ILQPTLEINTGHDLIK---KLHALKDSNPELAQLLLEQIYDNAMIAAGLNEDPRPMISRLNQLLTRALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196261 for 4555 contacts (-43.1/contact) +
2D Compatibility (PS) -62004 + (NN) -19121 + (LL) 2956
1D Compatibility (HY) -51200 + (ID) 10250
Total energy: -335880.0 ( -73.74 by residue)
QMean score : 0.473
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