Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSRSFFPEGASLEGKVKTIAELNQKLESRKSHSAEKVHQGFERIVELDHQCKGKGIFRSGKVA
2DJV Chain:A ((13-57))
-------QQIQALMDEVTKQGNIVRELKAQKA-DKNEVAAEVAKLLDLKKQLAVAEGKPPEAPK
General information:
TITO was launched using:
RESULT:
Template:
2DJV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2250 for 244 contacts (9.2/contact) +
2D Compatibility (PS) -4948 + (NN) -3042 + (LL) 692
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -8998.0 ( -36.88 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2DJV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DJV-query.scw
PDB file :
Tito_Scwrl_2DJV.pdb
: