Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETASSNQKKEWETDSKKKAEEIERLKTLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
2LXP Chain:B ((1-27))
--------------------------------------SADERQRMLVQRKDELLQQARKRFLNK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6921 for 101 contacts (68.5/contact) +
2D Compatibility (PS) -2977 + (NN) -2867 + (LL) 3952
1D Compatibility (HY) -400 + (ID) 450
Total energy: 4179.0 ( 41.38 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2LXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LXP-query.scw
PDB file :
Tito_Scwrl_2LXP.pdb
: