Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKYYDSNNIFAQILRGELPCKKVYEDEDVLAFYDKYPDAPVHILVVPKSQYISYDDFIFKASAEEIVGFFKTVREITYKYNLEKTGYRLVTNCGENGEQVVPHFHMHILGGKRLGKHVNL
4ZGL Chain:F ((2-102))
---------NVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGI----TPELMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGD--------
General information:
TITO was launched using:
RESULT:
Template:
4ZGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71916 for 708 contacts (-101.6/contact) +
2D Compatibility (PS) -11340 + (NN) -10241 + (LL) 1208
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -105089.0 ( -148.43 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4ZGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZGL-query.scw
PDB file :
Tito_Scwrl_4ZGL.pdb
: