Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYN----------------KEAWYADWFEPAKDILLQS--SFLFVRGNHENCDRAYEGWFRYLDSHPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLTQDSSDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPN-NVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 2HY1 Chain:A ((12-267)) | ------------------------------------------------------------------------------------------------------------------------------------------PRPDYVLLHISDTHLIDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLD---------RVCMIDGLRIIVLDTSVPGHHHGEIR--ASQLGWLAEELATPAPDGTILALHHPPIPSVL----DMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCGCNLVHVYPDTVVHSVIP------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61442 for 1588 contacts (-38.7/contact) +
2D Compatibility (PS) -22797 + (NN) -12706 + (LL) 13348
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -91147.0 ( -57.40 by residue)
QMean score : 0.297
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