Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYEDNSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYKCDANIAMHYFALTKKACIEGNLKQFVKYAELAVRNLPKDSPYLLQIEDMKRFNE |
| 3KD7 Chain:B ((20-87)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKQGDYQKAIEYYQKALEL--DPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELD----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35850 for 471 contacts (-76.1/contact) +
2D Compatibility (PS) -7528 + (NN) -7505 + (LL) 24796
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -29987.0 ( -63.67 by residue)
QMean score : 0.533
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