Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIKFLNPVTPSSRGTVLVSKIGLSRGKPEKSLAFGKKSSGGRNNNGRITIRHKGGGHKKKYRIIDFKRNRND-QGVVEKIEYDPNRSGFLALVSYKCDDTKSYILAPQGIKPG-DI-VMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGVATKGKKTRKKNKFSDKYIKQLKG |
1RL2 Chain:A ((60-125)) | ------------------------------------------------------------QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYA-DGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEVG-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9747 for 342 contacts (-28.5/contact) +
2D Compatibility (PS) -6598 + (NN) -3330 + (LL) 5224
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -20351.0 ( -59.51 by residue)
QMean score : 0.334
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