Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGCNLITITDDGGGIEKSDLELAFMRHATSKLSDSELIEIKHLGFRGEALSSIAAVSRIKLSSKANGASEAWSISYEGGEKIGELIPYSLPQGTHIEVRDLFFATPNRLKFLKTERAEIQSIVDIVNNLAMINYSIGFTLTSGSKKPLKYAKQTSLFSRLCEVEEEFQDNSLEINEEEDGVRLTGHICKPTVNRGKSDMIYTFVNGRPIKDNLLVSAIRYAYHDFIPSNRYPFATLHLEIPYDQIDVNVHPNKSEVRFQNKRLIYEIVRRGLIKALSTRTGNSAVSNIDRSRCQGIGKETSGLPFDVSESQGNDNHINNGKSRETKSERELYERRPNPFENRLMKESNSPSVGKKDLSERSVLFDSGIQKSLSQAKTVVLEREQIDLIENHPLGFARCQVYNTYIIAEARGKLIIVDQHAAHERLVYECLKQKSS---I-KRQKLLLSEVVEIKNQAGMEMVEVYKDKLFEMGFDIQINSENKVIVKEIPAILGTIDVKEMLIDIVDRLMEIEDMLPIEDKVNKILATIACHGSIRAGRTMKLEEMNVLLRQMEETPYSGQCNHGRPTHIEMKLSDIEKLFERR |
| 3NCV Chain:A ((463-654)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEE-CAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVG-----ASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98800 for 1369 contacts (-72.2/contact) +
2D Compatibility (PS) -20261 + (NN) -9379 + (LL) 27652
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -117188.0 ( -85.60 by residue)
QMean score : 0.494
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