Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKVKLGILISGRGSNMQALMKACQNYGFPAEMACVISNNNKAAGLKVAEQAGMPTFVVENK----PLDVDK-IHEILVQHEVNLVCLAGFMRILKADFLNKWHGKVINVHPSLLPSFKGLNAQEQALKAGVKVTGCTVHYVTSEVDAGAIIAQAAVPVLPNDDIHSLSKRILSEEHKCYVEAVRLIAMLSRKLERP
1MEN Chain:B ((11-196))---RILVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGEN


General information:
TITO was launched using:
RESULT:

Template: 1MEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160120 for 1497 contacts (-107.0/contact) +
2D Compatibility (PS) -20358 + (NN) -13974 + (LL) 480
1D Compatibility (HY) -19600 + (ID) 4600
Total energy: -218172.0 ( -145.74 by residue)
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_1MEN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MEN-query.scw
PDB file : Tito_Scwrl_1MEN.pdb: