Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVLVIGSGGR-EHALLWTLKKSPILTELYITPGRPAMGNLGVLVNINIQNSIDMTRFCKRENIELVIIGPEQPIIDGLADNLVAEGINVFAPSQAAAKLEASKSFTKGICKQYGIPTAKYECFVDERLAKSFVRSNKIKFPLVVKANGIAAGKGVIVCNTENEAFSAIDSMLVEKKFGESGEEIIIEEFLVGEEVSFFALVDGLKVVTLGCAKDYKRVDENNDSRNTGGMGSYSSPSIISK-DMEQKIIQRIIYPTIQALANMGTPYRGVLFAGLITCKDSPKLLEYNVRFGDPEAQSMLPRFDASCDLLELMLSVAKGKLSAKTVELNSKATVCVVVASKGYPGDYQKGEII-KGLA--KIE-SIPGVLVFHAGTKLDESGNWVSDGGRVLNIVGEGNTLEEAKSKVYSALNFLEWPGGFFRYDIGS |
| 2XCL Chain:A ((1-414)) | MNVLIIGKGGREHTLAWKAAQSSL-VENVFAAPGNDGMAASAQLVNIEESDHAGLVSFAKQNQVGLTIVGPEVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFTSFDEAKAYVQEK--GAPIVIKADGLAAGKGVTVAMTEEEAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVKGEKVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQISEETVRHAV-ETIVKPAAKAMVQEGRSFTGVLYAGLMLTENGSKVIEFNARFGDPETQ-VVLPRM-ESDLVQVLLDLLDDKEVDLR--WKDTAAVSVVL-AS--EGYP---ESYAKGTPIGSLAAETEQVVVFHAGTKA-EGGEFVTNGGRVANVTAFDETFEAARDRVYKAVDEIFKPGLFFRKDIGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XCL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240376 for 3695 contacts (-65.1/contact) +
2D Compatibility (PS) -45030 + (NN) -24269 + (LL) 1088
1D Compatibility (HY) -27200 + (ID) 8100
Total energy: -343887.0 ( -93.07 by residue)
QMean score : 0.496
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