Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSDDKEERLLSEKHKS---NPSMAVKWQRNIFTKTESQSSSKLYLVDLAKKSHKIISTPTSAYLPDWSHF
2LG4 Chain:A ((1-40))
AACSDRAHGHICESFKSFCKDSGRNGVKLRANCKKTCGLC-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21312 for 204 contacts (104.5/contact) +
2D Compatibility (PS) -3885 + (NN) -1898 + (LL) 1912
1D Compatibility (HY) 1600 + (ID) 350
Total energy: 18691.0 ( 91.62 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_2LG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LG4-query.scw
PDB file :
Tito_Scwrl_2LG4.pdb
: