Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVKKNRINEFITAKEVRLVDHNGEMVGVVSIGRALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPK-REGNQYFLALTTK
2CRQ Chain:A ((8-99))
------------------------------------------------------------------------------PKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAIRGGTASMCVFRH
General information:
TITO was launched using:
RESULT:
Template:
2CRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2553 for 579 contacts (-4.4/contact) +
2D Compatibility (PS) -9842 + (NN) -4044 + (LL) 5796
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -14143.0 ( -24.43 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2CRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CRQ-query.scw
PDB file :
Tito_Scwrl_2CRQ.pdb
: