Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDLLE-GACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
1E6E Chain:D ((8-108))
--TVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLE---AITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA------------
General information:
TITO was launched using:
RESULT:
Template:
1E6E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69548 for 723 contacts (-96.2/contact) +
2D Compatibility (PS) -10910 + (NN) -4030 + (LL) 336
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -97402.0 ( -134.72 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1E6E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E6E-query.scw
PDB file :
Tito_Scwrl_1E6E.pdb
: