Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNTGLTNNDILDDIVS---SDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNYSGEDRVKVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAIIAYEKGSPAEQKFWEKCFSLAE--RNFDQALHYINHHNAIQLSIEKARHYVNMAQNNINTFSDSSYKIALIDFLNASIERQA |
4JYX Chain:F ((25-345)) | -----------LDHILSLAEPDMLAVNQLIQKQVNS-DVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDVVDE--------TANEVFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYAS---------GDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETGNGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAHISVERVA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -176766 for 2464 contacts (-71.7/contact) +
2D Compatibility (PS) -31685 + (NN) -12430 + (LL) 1028
1D Compatibility (HY) -23200 + (ID) 5200
Total energy: -248253.0 ( -100.75 by residue)
QMean score : 0.452
|
|
|