Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKREIG----NGYQWFSLEDRSEE--VLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTRPQCCASVVAYSGKFLSPSRVA----PKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKEN--GVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
1FJ2 Chain:A ((20-229))
------------------------RKATAAVIFLHGLGDTGHGWAEAFAGIRS--SHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPP
General information:
TITO was launched using:
RESULT:
Template:
1FJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121734 for 1677 contacts (-72.6/contact) +
2D Compatibility (PS) -21033 + (NN) -8774 + (LL) 1800
1D Compatibility (HY) -8000 + (ID) 2650
Total energy: -160391.0 ( -95.64 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1FJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJ2-query.scw
PDB file :
Tito_Scwrl_1FJ2.pdb
: