Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVVTGMQP-----GGQLTITMGVENYPGFVS-IQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNND--DYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGA--FFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSFIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
3ITJ Chain:D ((24-334)) | --------KVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDL--SSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------RAEKNEKIEILYNTVALEAKG------LNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221090 for 2593 contacts (-85.3/contact) +
2D Compatibility (PS) -31227 + (NN) -9588 + (LL) 1576
1D Compatibility (HY) -21200 + (ID) 7100
Total energy: -288629.0 ( -111.31 by residue)
QMean score : 0.509
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