Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILKNN-----IKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRD-LMIIEEYIPGIELHTAVLLDEAAGTME-----IRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
| 4EG0 Chain:B ((16-307)) | ------------------VAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLSALKDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFETVMRGDDYAARATDIVAKLGLPLFVKPAS------V---------LKVKTA-DALP---AALSEA------HDKIVIVEKSIEGGGEYTACI----AGDLDLPLIKIVPAGEFYD---------TQYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAY-FLEVNTAPGMTDHSLPPKAAR-SIGIGYSELVVKVLSLTL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123935 for 2106 contacts (-58.8/contact) +
2D Compatibility (PS) -28602 + (NN) -12910 + (LL) 6104
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -179043.0 ( -85.02 by residue)
QMean score : 0.404
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